Lumiprobe citation list

Here is a list of research publications citing use of Lumiprobe products, sortable by date or cited product.

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In press

  1. Xiang, L.; Henderson, M. I.; Drennan, S.; Sabuncu, S.; Fischer, J. M.; Yildirim, A. Peptide Amphiphile–Nanoparticle Assemblies for Mechano-Chemo Combination Therapy. Nano Lett, 2025. doi: 10.1021/acs.nanolett.5c01112
  2. Liu, L.; Li, X.; Wu, Z.; Yang, L.; Huo, J.; Tang, S.; Cao, X.; Xu, Y.; Liao, X.; Qi, H.; Li, J.; Liu, J.; Tian, J.; Wen, R.; Wang, C.; Bai, C. Inflammation-targeting Fullerene Nanoparticles Dually Inhibit Macrophage and Osteoclast Differentiation for Mitigating Rheumatoid Arthritis. CCS Chemistry, 2024, 1-63. doi: 10.31635/ccschem.023.202303517

Preprint

  1. Gorshkova, M.; Vanchugova, L.; Osipova, N.; Nikitin, A.; Kotova, J.; Kovalenko, E.; Ermolenko, Y.; Malinovskaya, J.; Kovshova, T.; Gelperina, S. Hybrid DIVEMA/PLGA nanoparticles as the potential drug delivery system. Research Square, 2024, preprint. doi: 10.21203/rs.3.rs-4594368/v1
  2. Frazier, C.L.; Deb, D.; Weeks, A.M. Engineered reactivity of a bacterial E1-like enzyme enables ATP-driven modification of protein C termini. bioRxiv, 2024, preprint. doi: 10.1101/2024.05.13.593989
  3. Chandler, T.; Guo, M.; Su, Y.; Chen, J.; Wu, Y.; Liu, J.; Agashe, A.; Fischer, R.S.; Mehta, S.B.; Kumar, A.; Baskin, T.I.; Jamouillé, V.; Liu, H.; Swaminathan, V.; Nain, A.; Oldenbourg, R.; Riviére, P.L.; Shroff, H. Three-dimensional spatio-angular fluorescence microscopy with a polarized dual-view inverted selective-plane illumination microscope (pol-diSPIM). bioRxiv, 2024, preprint. doi: 10.1101/2024.03.09.584243
  4. Henry, W.S.; Müller, S.; Yang, J.-S.; Innes-Gold, S.; Das, S.; Reinhardt, F.; Sigmund, K.; Phadnis, V.V.; Wan, Z.; Eaton, E.; Sampaio, J.L.; Bell, G.W.; Viravalli, A.; Hammond, P.T.; Kamm, R.D.; Cohen, A.E.; Boehnke, N.; Hsu, V.W.; Levental, K.R.; Rodriguez, R.; Weinberg, R.A. Ether lipids influence cancer cell fate by modulating iron uptake. bioRxiv, 2024, preprint. doi: 10.1101/2024.03.20.585922
  5. Damm, A.; Paik, S.-J.; Sadhu, R.K.; Di-Cicco, A.; Manzi, J.; Castellana, M.; Margeat, E.; Dahan, M.; Sens, P.; Lévy, D.; Bassereau, P. Mechanosensitivity of an ABC Membrane Transporter Revealed by Single Molecule FRET and Activity Measurement. bioRxiv, 2024, preprint. doi: 10.1101/2024.01.24.577054
  6. Fischer, J.M.; Stewart, M.; Dai, M.; Drennan, S.; Holland, S.; Quentel, A.; Sabuncu, S.; Kingston, B.R.; Dengos, I.; Xiang, L.; Bonic, K.; Goncalves, F.; Yi, X.; Ranganathan, S.; Branchaud, B.P.; Muldoon, L.L.; Barajas, R.F.; Yildirim, A. Peptide Amphiphiles Hitchhike on Endogenous Biomolecules for Enhanced Cancer Imaging and Therapy. bioRxiv, 2024, preprint. doi: 10.1101/2024.02.21.580762
  7. Murali, V.S.; Rajendran, D.; Isogai, T.; DeBerardinis, R.J.; Danuser, G. RhoA activation promotes glucose uptake to elevate proliferation in MAPK inhibitor resistant melanoma cells. bioRxiv, 2024, preprint. doi: 10.1101/2024.01.09.574940
  8. Borisenko, I.; Predeus, A.; Lavrov, A.; Ereskovsky, A. First draft genome assembly and characterization of sponge Halisarca dujardinii reveals key components of basement membrane and broad repertoire of aggregation factors. bioRxiv, 2024, preprint. doi: 10.1101/2024.02.06.578935
  9. Kalinina, A.; Dhaliwal, J.; Xue, Y.; Vaculik, M.; McCambley, M.; Fong, B.C.; Cook, D.; Slack, R.S.; Lagace, D.C. Mitotic Activity and DNA Maintenance of Adult Neural Stem Cells is Regulated by Beclin1. bioRxiv, 2024, preprint. doi: 10.1101/2024.01.26.573092
  10. Rahni, R.; Guillotin, B.; Lee, L.R.; Birnbaum, K.D. A temporal map of division, chromatin modification, and identity specification in the regenerating root. bioRxiv, 2024, preprint. doi: 10.1101/2024.01.09.574680
  11. Huang, L.; Liu, P.; Du, Y.; Pan, D.; Lee, A.; Wolfe, S.A.; Wang, Y.-X. A brown fat-enriched adipokine, ASRA, is a leptin receptor antagonist that stimulates appetite. bioRxiv, 2024, preprint. doi: 10.1101/2023.09.12.557454
  12. Feng, X. A.; Yamadi, M.; Fu, Y.; Ness, K. M.; Liu, C.; Ahmed, I.; Bowman, G. D.; Johnson, M. E.; Ha, T.; Wu, C. GAGA zinc finger transcription factor searches chromatin by 1D-3D facilitated diffusion. bioRxiv, 2024, preprint. doi: 10.1101/2023.07.14.549009

2025

  1. Uckelmann, M.; Levina, V.; Taveneau, C.; Ng, X. H.; Pandey, V.; Martinez, J.; Mendiratta, S.; Houx, J.; Boudes, M.; Venugopal, H.; Trépout, S.; Fulcher, A. J.; Zhang, Q.; Flanigan, S.; Li, M.; Sierecki, E.; Gambin, Y.; Das, P. P.; Bell, O.; de Marco, A.; Davidovich, C. Dynamic PRC1–CBX8 Stabilizes a Porous Structure of Chromatin Condensates. Nat Struct Mol Biol, 2025, 32(3), 520–530. doi: 10.1038/s41594-024-01457-6
  2. Oh, H. J.; Lee, Y.; Hwang, H.; Hong, K.; Choi, H.; Kang, J. Y.; Jung, Y. Size-Controlled Assembly of Phase Separated Protein Condensates with Interfacial Protein Cages. Nat Commun, 2025, 16(1), 1009. doi: 10.1038/s41467-025-56391-y
  3. Marongiu, G. L.; Fink, U.; Schöpf, F.; Oder, A.; von Kries, J. P.; Roderer, D. Structural Basis for Immune Cell Binding of Fusobacterium Nucleatum via the Trimeric Autotransporter Adhesin CbpF. Proceedings of the National Academy of Sciences, 2025, 122(15), e2418155122. doi: 10.1073/pnas.2418155122
  4. Chandler, T.; Guo, M.; Su, Y.; Chen, J.; Wu, Y.; Liu, J.; Agashe, A.; Fischer, R. S.; Mehta, S. B.; Kumar, A.; Baskin, T. I.; Jaumouillé, V.; Liu, H.; Swaminathan, V.; Nain, A. S.; Oldenbourg, R.; La Riviere, P. J.; Shroff, H. Volumetric Imaging of the 3D Orientation of Cellular Structures with a Polarized Fluorescence Light-Sheet Microscope. Proceedings of the National Academy of Sciences, 2025, 122(8), e2406679122. doi: 10.1073/pnas.2406679122
  5. Thi Duy Ngoc, N.; Yurchenko, E. A.; Thi Hoai Trinh, P.; Menchinskaya, E. S.; Thi Dieu, T. V.; Savagina, A. D.; Minin, A.; Thinh, P. D.; Khanh, H. H. N.; Thi Thanh Van, T.; Yurchenko, A. N. Secondary Metabolites of Vietnamese Marine Fungus Penicillium Chermesinum 2104NT-1.3 and Their Cardioprotective Activity. Regional Studies in Marine Science, 2025, 81, 104003. doi: 10.1016/j.rsma.2024.104003
  6. Pislyagin, E. A.; Tarbeeva, D. V.; Yurchenko, E. A.; Menchinskaya, E. S.; Gorpenchenko, T. Y.; Pokhilo, N. D.; Kalinovskiy, A. I.; Aminin, D. L.; Fedoreyev, S. A. Neuroprotective Activity of Oligomeric Stilbenes from Alpha Grape Stems in In Vitro Models of Parkinson’s Disease. International Journal of Molecular Sciences, 2025, 26(6), 2411. doi: 10.3390/ijms26062411
  7. Omweri, J. M.; Houson, H. A.; Lynch, S. E.; Tekin, V.; Sorace, A. G.; Lapi, S. E. PET Imaging of 52Mn Labeled DOTATATE and DOTAJR11. Scientific Reports, 2025, 15(1), 2395. doi: 10.1038/s41598-025-85143-7
  8. Petrov, S. A.; Grigoriev, G. P.; Orlov, G. A.; Zyk, N. Y.; Grishin, Y. K.; Roznyatovsky, V. A.; Beloglazkina, M. A.; Petrova, J. V.; Machulkin, A. E.; Larkina, M. S.; Prach, A.; Varvashenya, R.; Bodenko, V.; Plotnikov, E.; Yusubov, M. S.; Beloglazkina, E. K. Choice of an Optimal Modular Strategy for the Synthesis of DOTA-Containing Heterobivalent Agents Targeting PSMA and GRPr. Bioconjugate Chem, 2025, 36(4), 748–761. doi: 10.1021/acs.bioconjchem.5c00033
  9. Hossain, K.; Smith, M.; Rufenacht, K. E.; O’Rourke, R.; Santoro, S. W. In Mice, Discrete Odors Can Selectively Promote the Neurogenesis of Sensory Neuron Subtypes That They Stimulate. eLife, 2025, 13, RP96152. doi: 10.7554/eLife.96152.2

2024

  1. Schöpf, F.; Marongiu, G.L.; Milaj, K.; Sprink, T.; Kikhney, J.; Moter, A.; Roderer, D. Structural basis of Fusobacterium nucleatumadhesin Fap2 interaction with receptors on cancer and immune cells. bioRxiv, 2024, preprint. doi: 10.1101/2024.02.28.582045
  2. Tchatchiashvilli, T.; Duering, H.; Mueller-Boetticher, L.; Grune, C.; Fischer, D.; Pletz, M.W.; Makarewicz, O. PEG-PLGA nanoparticles deposited in Pseudomonas aeruginosa and Burkolderia cenocepacia. Journal of Pharmaceutical Analysis, 2024, 14(12), 100939. doi: 10.1016/j.jpha.2024.01.007
  3. Johnson, J.L.; Steele, J.H.; Lin, R.; Stepanov, V.G.; Gavriliuc, M.N.; Wang, Y. Multi-Channel smFRET study reveals a Compact conformation of EF-G on the Ribosome. bioRxiv, 2024, preprint. doi: 10.1101/2024.01.27.577133
  4. Solé‐Porta, A.; Areny‐Balagueró, A.; Camprubí‐Rimblas, M.; Fernández Fernández, E.; O’Sullivan, A.; Giannoccari, R.; MacLoughlin, R.; Closa, D.; Artigas, A.; Roig, A. Efficient Nebulization and Pulmonary Biodistribution of Polymeric Nanocarriers in an Acute Lung Injury Preclinical Model. Small Science, 2024, 4(9), 2400066. doi: 10.1002/smsc.202400066
  5. Song, X.; Jin, J.; Yin, H.; Wang, T.; Zong, H.; Wang, F.; Liu, J.; Huang, X.; Wang, B.; Chai, C.; Li, Z.; Liu, D.; Wang, X.; Song, N. Trichoderma Viride F7 Improves Peanut Performance While Remedying Cadmium-Contaminated Soil with Microplastics. Pedosphere, 2024, 34(5), 971-980. doi: 10.1016/j.pedsph.2023.06.010
  6. Zhang, Y.; Liang, L.; Li, H.; Cao, Y.; Meng, D.; Li, X.; Wang, M.; Wang, J.; Yao, Y.; Zhang, S.; Chen, C.; Hou, P.; Yang, Q. Smart multi‐functional aggregates reoxygenate tumor microenvironment through a two‐pronged strategy to revitalize cancer immunotherapy. Aggregate, 2024, 5(4), e545. doi: 10.1002/agt2.545
  7. Kim, R.; Allbritton, N.L. A Microphysiological System with an Anaerobic Air‐Liquid Interface and Functional Mucus Layer for Coculture of Intestinal Bacteria and Primary Human Colonic Epithelium. Advanced Materials Interfaces, 2024, 11(25), 2400093. doi: 10.1002/admi.202400093
  8. Legen, J.; Lenzen, B.; Kachariya, N.; Feltgen, S.; Gao, Y.; Mergenthal, S.; Weber, W.; Klotzsch, E.; Zoschke, R.; Sattler, M.; Schmitz-Linneweber, C. A prion-like domain is required for phase separation and chloroplast RNA processing during cold acclimation in Arabidopsis. The Plant Cell, 2024, 36(8), koae145. doi: 10.1093/plcell/koae145
  9. Kim, D.; Whang, C.‐H.; Hong, J.; Prayogo, M.C.; Jung, W.; Lee, S.; Shin, H.; Kim, Y.; Yu, J.; Kim, M.J.; Kim, K.; Lee, H.‐S.; Jon, S. Glycocalyx‐Mimicking Nanoparticles with Differential Organ Selectivity for Drug Delivery and Therapy. Advanced Materials, 2024, 36(27), 2311283. doi: 10.1002/adma.202311283
  10. Proksch, J.; Dal Colle, M. C. S.; Heinz, F.; Schmidt, R. F.; Gottwald, J.; Delbianco, M.; Keller, B. G.; Gradzielski, M.; Alexiev, U.; Koksch, B. Impact of Glycan Nature on Structure and Viscoelastic Properties of Glycopeptide Hydrogels. Journal of Peptide Science, 2024, 30(8), e3599. doi: 10.1002/psc.3599
  11. Piranej, S.; Zhang, L.; Bazrafshan, A.; Marin, M.; Melikian, G. B.; Salaita, K. Rolosense: Mechanical Detection of SARS-CoV-2 Using a DNA-Based Motor. ACS Cent. Sci., 2024, 10(7), 1332–1347. doi: 10.1021/acscentsci.4c00312
  12. Wu, X.; Babi, M.; Moran-Mirabal, J.; Pelton, R. H. Grafting Polyanhydride Polymers to Cellulose Nanofibers. Cellulose, 2024, 31, 6193–6210. doi: 10.1007/s10570-024-05977-8
  13. Spoelstra, G.B.; Blok, S.N.; Reali Nazario, L.; Noord, L.; Fu, Y.; Simeth, N.A.; IJpma, F.F.A.; van Oosten, M.; van Dijl, J.M.; Feringa, B.L.; Szymanski, W.; Elsinga, P.H. Synthesis and preclinical evaluation of novel 18F-vancomycin-based tracers for the detection of bacterial infections using positron emission tomography. European Journal of Nuclear Medicine and Molecular Imaging, 2024, 51, 2583–2596. doi: 10.1007/s00259-024-06717-7
  14. Jurczak, P.; Fayad, N.; Benard, M.; Czaplewska, P.; Hildebrandt, N. Monomer‐dimer equilibrium of human cystatin C during internalization into cancer cells. ChemBioChem, 2024, 25(16), e202400226. doi: 10.1002/cbic.202400226
  15. Kaneda, K.; Takeuchi, Y.; Yamanaka, K.; Hasebe, F.; Maruyama, C.; Hamano, Y. Cell-penetrating activity of a short-chain ε-poly-l-α-lysine. Journal of Bioscience and Bioengineering, 2024, 138(3), 249-253. doi: 10.1016/j.jbiosc.2024.06.006
  16. Skorobogatov, E. V.; Shik, A. V.; Sobolev, P. V.; Stepanova, I. A.; Orekhov, V. S.; Ustyuzhanin, A. O.; Koksharova, M. V.; Ikhalaynen, Y. A.; Timchenko, Y. V.; Rodin, I. A.; Beklemishev, M. K. Monitoring Different Water Types for Engine Oil–Water-Soluble Fraction and Iron(2+) Using a Reaction-Based Optical Sensing Strategy: A Proof-of-Concept Study. Ind. Eng. Chem. Res., 2024, 63(28), 12336–12349. doi: 10.1021/acs.iecr.4c01502
  17. Campea, M. A.; Macdonald, C.; Hoare, T. Supramolecularly-Cross-Linked Nanogel Assemblies for On-Demand, Ultrasound-Triggered Chemotherapy. Biomacromolecules, 2024. doi: 10.1021/acs.biomac.3c01432
  18. Krause, K. D.; Rees, K.; Darwish, G. H.; Bernal-Escalante, J.; Algar, W. R. Bait and Cleave: Exosite-Binding Peptides on Quantum Dots Selectively Accelerate Protease Activity for Sensing with Enhanced Sensitivity. ACS Nano, 2024, 18(26), 17018–17030. doi: 10.1021/acsnano.4c03265
  19. Schvartzman, C.; Ibarboure, E.; Martin, A.; Garanger, E.; Mutschler, A.; Lecommandoux, S. Protocells Featuring Membrane-Bound and Dynamic Membraneless Organelles. Biomacromolecules, 2024, 25(7), 4087–4094. doi: 10.1021/acs.biomac.4c00200
  20. Yu, J.; Ma, Y.; Zhang, X.; Wang, S.; Zhou, L.; Liu, X.; Li, L.; Liu, L.; Song, H.; Luo, Y.; Wen, S.; Li, W.; Niu, X. β-Cyclodextrin and Hyaluronic Acid-Modified Targeted Nanodelivery System for Atherosclerosis Prevention. ACS Appl. Mater. Interfaces, 2024, 16(27), 35421–35437. doi: 10.1021/acsami.4c01540
  21. Park, B.; Han, G.; Jin, D. Y.; Gil, K. C.; Shin, D.; Lee, J.; Park, J. Y.; Jang, H.; Park, D.; Lee, S.; Kim, K.; Yang, Y.; Kim, Y.; Kim, J.-S.; Kim, S. H.; Shim, M. K. Mucoadhesive Mesalamine Prodrug Nanoassemblies to Target Intestinal Macrophages for the Treatment of Inflammatory Bowel Disease. ACS Nano, 2024, 18(25), 16297–16311. doi: 10.1021/acsnano.4c05544
  22. Comeo, E.; Goulding, J.; Lin, C.-Y.; Groenen, M.; Woolard, J.; Kindon, N. D.; Harwood, C. R.; Platt, S.; Briddon, S. J.; Kilpatrick, L. E.; Scammells, P. J.; Hill, S. J.; Kellam, B. Ligand-Directed Labeling of the Adenosine A1 Receptor in Living Cells. J. Med. Chem., 2024, 67(14), 12099–12117. doi: 10.1021/acs.jmedchem.4c00835
  23. Chen, J.; Li, F.; Zhao, B.; Gu, J.; Brejcha, N. M.; Bartoli, M.; Zhang, W.; Zhou, Y.; Fu, S.; Domena, J. B.; Zafar, A.; Zhang, F.; Tagliaferro, A.; Verde, F.; Zhang, F.; Zhang, Y.; Leblanc, R. M. Gene Transfection Efficiency Improvement with Lipid Conjugated Cationic Carbon Dots. ACS Appl. Mater. Interfaces, 2024, 16(21), 27087–27101. doi: 10.1021/acsami.4c02614
  24. Kim, S. H.; Chun, C.; Yoon, T.-Y. Profiling of BCLxL Protein Complexes in Non-Small Cell Lung Cancer Cells via Multiplexed Single-Molecule Pull-Down and Co-Immunoprecipitation. Anal. Chem., 2024, 96(22), 8932–8941. doi: 10.1021/acs.analchem.3c05801
  25. Huynh, G. T.; Tunny, S. S.; Frith, J. E.; Meagher, L.; Corrie, S. R. Organosilica Nanosensors for Monitoring Spatiotemporal Changes in Oxygen Levels in Bacterial Cultures. ACS Sens., 2024, 9(5), 2383–2394. doi: 10.1021/acssensors.3c02747
  26. Zeng, Z.; Tan, R.; Chen, S.; Chen, H.; Liu, Z.; Liu, L.; Li, M.; Chen, Y. Di-PEGylated insulin: A long-acting insulin conjugate with superior safety in reducing hypoglycemic events. Acta Pharmaceutica Sinica B, 2024, 14(6), 2761-2772. doi: 10.1016/j.apsb.2024.02.022
  27. Lee, W.; Lim, Y.G.; Song, Y.J.; Park, K. Intracellular cholesterol efflux effects of mannose-beta cyclodextrin conjugates on cholesterol-laden foam cells. Biotechnology and Bioprocess Engineering, 2024, 29, 483–493. doi: 10.1007/s12257-024-00101-w
  28. Grosmanová, E.; Pola, R.; Filipová, M.; Henry, M.; Coll, J.‐L.; Etrych, T. Novel strategies for enhanced fluorescence visualization of glioblastoma tumors based on HPMA copolymers conjugated with tumor targeting and/or cell‐penetrating peptides. VIEW, 2024, 5(3), 20230116. doi: 10.1002/viw.20230116
  29. Timchenko, A.I.; Simakova, U.V.; Portnova, D.A. Morphological and genetic diversity of ice-associated nematodes of the family Xyalidae Chitwood, 1951. Polar Biology, 2024, 47, 569–587. doi: 10.1007/s00300-024-03245-w
  30. Lin, C.; Cheng, T.-M.; Liu, Y.-C.; Hsu, F.-Y.; Shih, C.-M.; Tsai, M.-L.; Shih, C.-C.; Mi, F.-L. Dual-Targeting EGCG/NO-Supplying protein assembled nanoparticles with Multi-Synergistic effects against atherosclerosis. Chemical Engineering Journal, 2024, 493, 152755. doi: 10.1016/j.cej.2024.152755
  31. Karan, S.; Durán-Meza, A. L.; Chapman, A.; Tanimoto, C.; Chan, S. K.; Knobler, C. M.; Gelbart, W. M.; Steinmetz, N. F. In Vivo Delivery of Spherical and Cylindrical In Vitro Reconstituted Virus-like Particles Containing the Same Self-Amplifying MRNA. Mol. Pharmaceutics, 2024, 21(6), 2727–2739. doi: 10.1021/acs.molpharmaceut.3c01105
  32. Huang, Y.; Osouli, A.; Pham, J.; Mancino, V.; O’Grady, C.; Khan, T.; Chaudhuri, B.; Pastor-Soler, N. M.; Hallows, K. R.; Chung, E. J. Investigation of Basolateral Targeting Micelles for Drug Delivery Applications in Polycystic Kidney Disease. Biomacromolecules, 2024, 25(5), 2749–2761. doi: 10.1021/acs.biomac.3c01397
  33. Sun, B.; Yang, H.; Li, Y.; Scheerstra, J. F.; van Stevendaal, M. H. M. E.; Li, S.; van Hest, J. C. M. Targeted PH-Activated Peptide-Based Nanomaterials for Combined Photodynamic Therapy with Immunotherapy. Biomacromolecules, 2024, 25(5), 3044–3054. doi: 10.1021/acs.biomac.4c00141
  34. Mazrad, Z. A. I.; Refaat, A.; Morrow, J. P.; Voelcker, N. H.; Nicolazzo, J. A.; Leiske, M. N.; Kempe, K. Folic Acid-Conjugated Brush Polymers Show Enhanced Blood–Brain Barrier Crossing in Static and Dynamic In Vitro Models Toward Brain Cancer Targeting Therapy. ACS Biomater. Sci. Eng., 2024, 10(5), 2894–2910. doi: 10.1021/acsbiomaterials.3c01650
  35. Jensen, M.; Stenfelt, L.; Ricci Hagman, J.; Pichler, M.J.; Weikum, J.; Nielsen, T.S.; Hult, A.; Morth, J.P.; Olsson, M.L.; Abou Hachem, M. Akkermansia muciniphila exoglycosidases target extended blood group antigens to generate ABO-universal blood. Nature Microbiology, 2024, 9, 1176–1188. doi: 10.1038/s41564-024-01663-4
  36. Breusa, S.; Thomas, E.; Baldinotti, N.; Zilio, S.; Delcros, J.-G.; Hernandez-Palomino, D.M.; Qi, W.; Guerin, H.; Gibert, B.; Mehlen, P.; Marigo, I.; Kryza, D.; Lollo, G. Anti-Netrin-1 decorated nanoparticles combined with chemotherapy for the treatment of triple-negative breast cancer. Biomaterials Advances, 2024, 161, 213881. doi: 10.1016/j.bioadv.2024.213881
  37. Ehrhorn, E.; Lovell, P.; Svechkarev, D.; Romanova, S.; Mohs, A. Optimizing the performance of silica nanoparticles functionalized with a near-infrared fluorescent dye for bioimaging applications. Nanotechnology, 2024, 35(30), 305605. doi: 10.1088/1361-6528/ad3fc5
  38. Gleixner, J.; Kopanchuk, S.; Grätz, L.; Tahk, M.-J.; Laasfeld, T.; Veikšina, S.; Höring, C.; Gattor, A. O.; Humphrys, L. J.; Müller, C.; Archipowa, N.; Köckenberger, J.; Heinrich, M. R.; Kutta, R. J.; Rinken, A.; Keller, M. Illuminating Neuropeptide Y Y4 Receptor Binding: Fluorescent Cyclic Peptides with Subnanomolar Binding Affinity as Novel Molecular Tools. ACS Pharmacol. Transl. Sci., 2024, 7(4), 1142–1168. doi: 10.1021/acsptsci.4c00013
  39. Cai, J.; Liu, S.; Zhong, Q.; Shang, Y.; Chen, Z.; Yao, Y.; Zhou, B.; Yin, F.; Zhao, J.; Zheng, L. Multifunctional PDA/ZIF8 based hydrogel dressing modulates the microenvironment to accelerate chronic wound healing by ROS scavenging and macrophage polarization. Chemical Engineering Journal, 2024, 487, 150632. doi: 10.1016/j.cej.2024.150632
  40. Yun, W.S.; Yang, W.; Shim, M.K.; Song, S.; Choi, J.; Kim, J.; Kim, J.; Moon, Y.; Jo, S.H.; Lim, D.-K.; Kim, K. Accurately controlled tumor temperature with silica-coated gold nanorods for optimal immune checkpoint blockade therapy. Biomaterials Research, 2024, 28, 0024. doi: 10.34133/bmr.0024
  41. Feld, L. G.; Boehme, S. C.; Morad, V.; Sahin, Y.; Kaul, C. J.; Dirin, D. N.; Rainò, G.; Kovalenko, M. V. Quantifying Förster Resonance Energy Transfer from Single Perovskite Quantum Dots to Organic Dyes. ACS Nano, 2024, 18(14), 9997–10007. doi: 10.1021/acsnano.3c11359
  42. Slapak, E.J.; el Mandili, M.; Ten Brink, M.S.; Kros, A.; Bijlsma, M.F.; Spek, C.A. CAPN2-responsive mesoporous silica nanoparticles: A promising nanocarrier for targeted therapy of pancreatic cancer. Cancer Letters, 2024, 590, 216845. doi: 10.1016/j.canlet.2024.216845
  43. Marziali, L.N.; Hwang, Y.; Palmisano, M.; Cuenda, A.; Sim, F.J.; Gonzalez, A.; Volsko, C.; Dutta, R.; Trapp, B.D.; Wrabetz, L.; Feltri, M.L. p38γ MAPK delays myelination and remyelination and is abundant in multiple sclerosis lesions. Brain, 2024, 147(5), 1871-1886. doi: 10.1093/brain/awad421
  44. Lysakova, E.; Shumeev, A.; Laktyushkin, V.; Chuvpilo, S.; Rybtsov, S. Assay Development for Phagocytosis Activity Evaluation. Biol. Life Sci. Forum, 2024, 31(1), 15. doi: 10.3390/ecm2023-16444
  45. Feng, X.; Cui, X.; Zhang, L.-S.; Ye, C.; Wang, P.; Zhong, Y.; Wu, T.; Zheng, Z.; He, C. Sequencing of N6-Methyl-Deoxyadenosine at Single-Base Resolution across the Mammalian Genome. Molecular Cell, 2024, 84(3), 596-610.e6. doi: 10.1016/j.molcel.2023.12.021
  46. Elkhashab, M.; Dilek, Y.; Foss, M.; Creemers, L. B.; Howard, K. A. A Modular Albumin-Oligonucleotide Biomolecular Assembly for Delivery of Antisense Therapeutics. Mol. Pharmaceutics, 2024, 21(2), 491–500. doi: 10.1021/acs.molpharmaceut.3c00561
  47. Chau, Q.; Corado-Santiago, L.; Jones, S.; Dattelbaum, J.; Skromne, I. Physicochemical and Inflammatory Analysis of Unconjugated and Conjugated Bone-Binding Carbon Dots. ACS Omega, 2024, 9(1), 1320-1326. doi: 10.1021/acsomega.3c07653
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2020

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2018

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2017

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2016

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2015

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  2. Gremse, F.; Doleschel, D.; Zafarnia, S.; Babler, A.; Jahnen-Dechent, W.; Lammers, T.; Lederle, W.; Kiessling, F. Hybrid µCT-FMT imaging and image analysis. Journal of Visualized Experiments, 2015, e52770. doi: 10.3791/52770
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  4. Mahmoodi, M.M.; Rashidian, M.; Zhang, Y.; Distefano, M.D. Application of meta- and para- Phenylenediamine as Enhanced Oxime Ligation Catalysts for Protein Labeling, PEGylation, Immobilization, and Release. Current Protocols in Protein Science, 2015, 79, 15.4.1–15.4.28. doi: 10.1002/0471140864.ps1504s79
  5. Zhang, Rui and Yang, Jiyuan and Chu, Te-Wei and Hartley, Jonathan M. and Kopeček, Jindřich. Multimodality Imaging of Coiled-Coil Mediated Self-Assembly in a "Drug-Free" Therapeutic System. Advanced Healthcare Materials, 2015, 4(7), 1054–1065. doi: 10.1002/adhm.201400679
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  22. Demillo, V.G.; Zhu, X. Zwitterionic amphiphile coated magnetofluorescent nanoparticles – synthesis, characterization and tumor cell targeting. Journal of Materials Chemistry B, 2015, 3, 8328–8336. doi: 10.1039/C5TB01116G
  23. Wang, C.; Wang, Y.; Li, Y.; Bodemann, B.; Zhao, T.; Ma, X.; Huang, G.; Hu, Z.; DeBerardinis, R.J.; White, M.A.; Gao, J. A nanobuffer reporter library for fine-scale imaging and perturbation of endocytic organelles. Nature Communications, 2015, 6, 8524. doi: 10.1038/ncomms9524
  24. Zhou, B.; Wang, H.; Liu, R.; Wang, M.; Deng, H.; Giglio, B.; Gill, P.S.; Shan, H.; Li, Z. PET Imaging of Dll4 Expression in Glioblastoma and Colorectal Cancer Xenografts Using 64Cu-Labeled Monoclonal Antibody 61B. Molecular Pharmaceutics, 2015, 12(10), 3527–3534. doi: 10.1021/acs.molpharmaceut.5b00105
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  27. Abolmaali, S.; Tamaddon, A.; Kamali-Sarvestani, E.; Ashraf, M.; Dinarvand, R. Stealth Nanogels of Histinylated Poly Ethyleneimine for Sustained Delivery of Methotrexate in Collagen-Induced Arthritis Model. Pharmaceutical Research, 2015, 32(10), 3309–3323. doi: 10.1007/s11095-015-1708-0
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  29. Schwarz, B.; Madden, P.; Avera, J.; Gordon, B.; Larson, K.; Miettinen, H.; Uchida, M.; LaFrance, B.; Basu, G.; Rynda-Apple, A.; Douglas, T. Symmetry Controlled, Genetic Presentation of Bio-Active Proteins on the P22 Virus-Like Particle Using an External Decoration Protein. ACS Nano, 2015, 9(9), 9134–9147. doi: 10.1021/acsnano.5b03360
  30. Bruckman, M.; Randolph, L.; Gulati, N.; Stewart, P.; Steinmetz, N.F. Silica mineralization of Gd(DOTA)-loaded viral nanoparticles enhances MRI relaxivity and avoids immune recognition. Journal of Materials Chemistry B, 2015, 3(38), 7503–7510. doi: 10.1039/c5tb01014d
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2014

  1. Hickey, S. F.; Hammond, M.C. Structure-Guided Design of Fluorescent S-Adenosylmethionine Analogs for a High-Throughput Screen to Target SAM-I Riboswitch RNAs. Chemistry & Biology, 2014, 21(3), 345–356. doi: 10.1016/j.chembiol.2014.01.004
  2. Wang, X.; Huang, S.S.; Heston, W.D.W.; Guo, H.; Wang, B.-C.; Basilion, J.P. Development of Targeted Near-Infrared Imaging Agents for Prostate Cancer. Molecular Cancer Therapeutics, 2014, 13(11), 2595–2606. doi: 10.1158/1535-7163.mct-14-0422
  3. Shieh, P.; Siegrist, M.S.; Cullen, A.J.; Bertozzi, C.R. Imaging bacterial peptidoglycan with near-infrared fluorogenic azide probes. Proceedings of the National Academy of Sciences of the U.S.A., 2014, 111(15), 5456–5461. doi: 10.1073/pnas.1322727111
  4. Bird, G.H., Boyapalle, S.; Wong, T.; Opoku-Nsiah, K.; Bedi, R.; Crannell, W.C.; Perry, A.F.; Nguyen, H.; Sampayo, V.; Devareddy, A.; Mohapatra, S.; Mohapatra S.S.; Walensky, L.D. Mucosal delivery of a double-stapled {RS}V peptide prevents nasopulmonary infection. Journal of Clinical Investigation, 2014, 124(5), 2113–2124. doi: 10.1172/jci71856
  5. Jia, L.; Chisari, M.; Maktabi, M.H.; Sobieski, C.; Zhou, H.; Konopko, A.M.; Martin, B.R.; Mennerick, S.J.; Blumer, K.J. A Mechanism Regulating G Protein-coupled Receptor Signaling That Requires Cycles of Protein Palmitoylation and Depalmitoylation. Journal of Biological Chemistry, 2014, 289(9), 6249–6257. doi: 10.1074/jbc.m113.531475
  6. Zhang, X.-N.; Zhang, C.-G.; Zhu, Q.-L.; Zhou, Y.; Liu, Y.; Chen, W.-L.; Yang, S.-D. Zhou, X.-F. Zhu, A.-J.; Zhang, X.-N.; Jin, Y. N-Succinyl-chitosan nanoparticles coupled with low-density lipoprotein for targeted osthole-loaded delivery to low-density lipoprotein receptor-rich tumors. International Journal of Nanomedicine, 2014, 9, 2919–2932. doi: 10.2147/ijn.s59799
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  10. Terekhov, S.S.; Smirnov, I.V.; Shamborant, O.G.; Zenkova, M.A.; Chernolovskaya, E.L.; Gladkikh, D.V.; Murashev, A.N.; Dyachenko, I.A.; Knorre, V.D.; Belogurov, A.A.; Ponomarenko, N.A.; Deyev, S.M.; Vlasov, V.V.; Gabibov, A.G. Excessive Labeling Technique Provides a Highly Sensitive Fluorescent Probe for Real-time Monitoring of Biodegradation of Biopolymer Pharmaceuticals in vivo. Acta Naturae, 2014, 6(4), 54–59
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  13. Guo, Y.; Yuan, H.; Claudio, N.M.; Kura, S.; Shakerdge, N.; Mempel, T.R.; Bacskai, B.J.; Josephson, L. PEG-Like Nanoprobes: Multimodal, Pharmacokinetically and Optically Tunable Nanomaterials. PLoS ONE, 2014, 9(4), e95406. doi: 10.1371/journal.pone.0095406
  14. Al-Hilal, T.A.; Alam, F.; Park, J.W.; Kim, K.; Kwon, I.C.; Ryu, G.H.; Byun, Y. Prevention effect of orally active heparin conjugate on cancer-associated thrombosis. Journal of Controlled Release, 2014, 195, 155-161. doi: 10.1016/j.jconrel.2014.05.027
  15. Lin, Y.-A.; Cheetham, A.G.; Zhang, P.; Ou, Y.-C.; Li, Y.; Liu, G.; Hermida Merino, D.; Hamley, I.W.; Cui, H. Multi-Walled Nanotubes Formed by Catanionic Mixtures of Drug Amphiphiles. ACS Nano, 2014, 8(12), 12690-12700. doi: 10.1021/nn505688b
  16. Ayala-Orozco, C.; Liu, J.G.; Knight, M.W.; Wang, Y.; Day, J.K.; Nordlander, P.; Halas, N.J. Fluorescence Enhancement of Molecules Inside a Gold Nanomatryoshka. Nano Letters, 2014, 14(5), 2926-2933. doi: 10.1021/nl501027j
  17. Bříza, T.; Rimpelová, S.; Králová, J.; Záruba, K.; Kejík, Z.; Ruml, T.; Martásek, P.; Král, V. Pentamethinium fluorescent probes: The impact of molecular structure on photophysical properties and subcellular localization. Dyes and Pigments, 2014, 107, 51-59. doi: 10.1016/j.dyepig.2013.12.021
  18. Bamrungsap, S.; Apiwat, C.; Chantima, W.; Dharakul, T.; Wiriyachaiporn, N. Rapid and sensitive lateral flow immunoassay for influenza antigen using fluorescently-doped silica nanoparticles. Microchimica Acta, 2014, 181(1–2), 223-230. doi: 10.1007/s00604-013-1106-4
  19. Brady, M.L.; Raghavan, R.; Singh, D.; Anand, P.; Fleisher, A.S.; Mata, J.; Broaddus, W.C.; Olbricht, W.L. In vivo performance of a microfabricated catheter for intraparenchymal delivery. Journal of Neuroscience Methods, 2014, 229, 76-83. doi: 10.1016/j.jneumeth.2014.03.016
  20. Brand, C.; Abdel-Atti, D.; Zhang, Y.; Carlin, S.; Clardy, S.M.; Keliher, E.J.; Weber, W.A.; Lewis, J.S.; Reiner, T. In Vivo Imaging of GLP-1R with a Targeted Bimodal PET/Fluorescence Imaging Agent. Bioconjugate Chemistry, 2014, 25(7), 1323-1330. doi: 10.1021/bc500178d
  21. Bruckman, M.A.; Randolph, L.N.; VanMeter, A.; Hern, S.; Shoffstall, A.J.; Taurog, R.E.; Steinmetz, N.F. Biodistribution, pharmacokinetics, and blood compatibility of native and PEGylated tobacco mosaic virus nano-rods and -spheres in mice. Virology, 2014, 449, 163-173. doi: 10.1016/j.virol.2013.10.035
  22. Bruckman, M.A.; Steinmetz, N.F. Chemical Modification of the Inner and Outer Surfaces of Tobacco Mosaic Virus (TMV). Methods in Molecular Biology (Virus Hybrids as Nanomaterials), 2014, 1108, 173-185. doi: 10.1007/978-1-62703-751-8_13
  23. Burnham-Marusich, A.R.; Plechaty, A.M.; Berninsone, P.M. Size-matched alkyne-conjugated cyanine fluorophores to identify differences in protein glycosylation. Electrophoresis, 2014, 35(18), 2621-2625. doi: 10.1002/elps.201400241
  24. Duellberg, C.; Trokter, M.; Jha, R.; Sen, I.; Steinmetz, M.O.; Surrey, T. Reconstitution of a hierarchical +TIP interaction network controlling microtubule end tracking of dynein. Nature Cell Biology, 2014, 16(8), 804-811. doi: 10.1038/ncb2999
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  26. Geertsema, H.J.; Kulczyk, A.W.; Richardson, C.C.; van Oijen, A.M. Single-molecule studies of polymerase dynamics and stoichiometry at the bacteriophage T7 replication machinery. Proceedings of the National Academy of Sciences of the U.S.A., 2014, 111(11), 4073-4078. doi: 10.1073/pnas.1402010111
  27. Graen, T.M.D.; Hoefling, M.; Grubmüller, H. AMBER-DYES: Characterization of Charge Fluctuations and Force Field Parameterization of Fluorescent Dyes for Molecular Dynamics Simulations. Journal of Chemical Theory and Computation, 2014, 10(12), 5505-5512. doi: 10.1021/ct500869p
  28. Hatzenpichler, R.; Scheller, S.; Tavormina, P.L.; Babin, B.M.; Tirrell, D.A.; Orphan, V.J. In situ visualization of newly synthesized proteins in environmental microbes using amino acid tagging and click chemistry. Environmental Microbiology, 2014, 16(8), 2568-2590. doi: 10.1111/1462-2920.12436
  29. Hong, T.N.; van der Hoorn, R.A.L. DIGE-ABPP by Click Chemistry: Pairwise Comparison of Serine Hydrolase Activities from the Apoplast of Infected Plants. Plant-Pathogen Interactions (Methods in Molecular Biology), 2014, 1127, 183-194. doi: 10.1007/978-1-62703-986-4_15
  30. Hu, S.-H.; Fang, R.-H.; Chen, Y.-W.; Liao, B.-J.; Chen, I.-W.; Chen, S.-Y. Photoresponsive Protein-Graphene-Protein Hybrid Capsules with Dual Targeted Heat-Triggered Drug Delivery Approach for Enhanced Tumor Therapy. Advanced Functional Materials, 2014, 24(26), 4144-4155. doi: 10.1002/adfm.201400080
  31. Hu, X.; Wang, Q.; Liu, Y.; Liu, H.; Qin, C.; Cheng, K.; Robinson, W.; Gray, B.D.; Pak, K.Y.; Yu, A. et al. Optical imaging of articular cartilage degeneration using near-infrared dipicolylamine probes. Biomaterials, 2014, 35(26), 7511-7521. doi: 10.1016/j.biomaterials.2014.05.042
  32. Kim, J.; Yang, Y.; Song, S.S.; Na, J.-H.; Oh, K.J.; Jeong, C.; Yu, Y.G.; Shin, Y.-K. Beta-Amyloid Oligomers Activate Apoptotic BAK Pore for Cytochrome c Release. Biophysical Journal, 2014, 107(7), 1601-1608. doi: 10.1016/j.bpj.2014.07.074
  33. Kim, K.S.; Park, W.; Hu, J.; Bae, Y.H.; Na, K. A cancer-recognizable MRI contrast agents using pH-responsive polymeric micelle. Biomaterials, 2014, 35(1), 337-343. doi: 10.1016/j.biomaterials.2013.10.004
  34. Kupryushkin, M.S.; Nekrasov, M.D.; Stetsenko, D.A.; Pyshnyi, D.V. Efficient Functionalization of Oligonucleotides by New Achiral Nonnucleosidic Monomers. Organic Letters, 2014, 16(11), 2842-2845. doi: 10.1021/ol500668n
  35. Li, G.; Xing, Y.; Wang, J.; Conti, P.S.; Chen, K. Near-infrared fluorescence imaging of CD13 receptor expression using a novel Cy5.5-labeled dimeric NGR peptide. Amino Acids, 2014, 46(6), 1547-1556. doi: 10.1007/s00726-014-1727-x
  36. Li, L.-L.; Xu, J.-H.; Qi, G.-B.; Zhao, X.; Yu, F.; Wang, H. Core-Shell Supramolecular Gelatin Nanoparticles for Adaptive and "On-Demand" Antibiotic Delivery. ACS Nano, 2014, 8(5), 4975-4983. doi: 10.1021/nn501040h
  37. Lin, W.; Liu, J.; Jeffries, C.; Yang, L.; Lu, Y.; Lee, R.E.; Chen, T. Development of BODIPY FL Vindoline as a Novel and High-Affinity Pregnane X Receptor Fluorescent Probe. Bioconjugate Chemistry, 2014, 25(9), 1664-1677. doi: 10.1021/bc5002856
  38. Lin, X.; Zhu, H.; Luo, Z.; Hong, Y.; Zhang, H.; Liu, X.; Ding, H.; Tian, H.; Yang, Z. Near-Infrared Fluorescence Imaging of Non-Hodgkin's Lymphoma CD20 Expression Using Cy7-Conjugated Obinutuzumab. Molecular Imaging and Biology, 2014. doi: 10.1007/s11307-014-0742-3
  39. Lv, S.; Tang, Z.; Li, M.; Lin, J.; Song, W.; Liu, H.; Huang, Y.; Zhang, Y.; Chen, X. Co-delivery of doxorubicin and paclitaxel by PEG-polypeptide nanovehicle for the treatment of non-small cell lung cancer. Biomaterials, 2014, 35(23), 6118-6129. doi: 10.1016/j.biomaterials.2014.04.034
  40. Ma, X.; Cheng, Z.; Jin, Y.; Liang, X.; Yang, X.; Dai, Z.; Tian, J. SM5-1-Conjugated PLA nanoparticles loaded with 5-fluorouracil for targeted hepatocellular carcinoma imaging and therapy. Biomaterials, 2014, 35(9), 2878-2889. doi: 10.1016/j.biomaterials.2013.12.045
  41. Morton, S.W.; Lee, M.J.; Deng, Z.J.; Dreaden, E.C.; Siouve, E.; Shopsowitz, K.E.; Shah, N.J.; Yaffe, M.B.; Hammond, P.T. A Nanoparticle-Based Combination Chemotherapy Delivery System for Enhanced Tumor Killing by Dynamic Rewiring of Signaling Pathways. Science Signaling, 2014, 7(325), ra44-ra44. doi: 10.1126/scisignal.2005261
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  45. Novo, L.; Rizzo, L.Y.; Golombek, S.K.; Dakwar, G.R.; Lou, B.; Remaut, K.; Mastrobattista, E.; van Nostrum, C.F.; Jahnen-Dechent, W.; Kiessling, F. et al. Decationized polyplexes as stable and safe carrier systems for improved biodistribution in systemic gene therapy. Journal of Controlled Release, 2014, 195, 162-175. doi: 10.1016/j.jconrel.2014.08.028
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  52. Teske, N.S.; Voigt, J.; Shastri, V.P. Clickable Degradable Aliphatic Polyesters via Copolymerization with Alkyne Epoxy Esters: Synthesis and Postfunctionalization with Organic Dyes. Journal of the American Chemical Society, 2014, 136(29), 10527-10533. doi: 10.1021/ja505629w
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  54. Viehweger, K.; Barbaro, L.; García, K.P.; Joshi, T.; Geipel, G.; Steinbach, J.; Stephan, H.; Spiccia, L.; Graham, B. EGF Receptor-Targeting Peptide Conjugate Incorporating a Near-IR Fluorescent Dye and a Novel 1,4,7-Triazacyclononane-Based 64Cu(II) Chelator Assembled via Click Chemistry. Bioconjugate Chemistry, 2014, 25(5), 1011-1022. doi: 10.1021/bc5001388
  55. Wang, W.; Ji, X.; Na, H.B.; Safi, M.; Smith, A.; Palui, G.; Perez, J.M.; Mattoussi, H. Design of a Multi-Dopamine-Modified Polymer Ligand Optimally Suited for Interfacing Magnetic Nanoparticles with Biological Systems. Langmuir, 2014, 30(21), 6197-6208. doi: 10.1021/la500974r
  56. Wang, X.; Yang, Y.; Jia, H.; Jia, W.; Miller, S.; Bowman, B.; Feng, J.; Zhan, F. Peptide decoration of nanovehicles to achieve active targeting and pathology-responsive cellular uptake for bone metastasis chemotherapy. Biomaterials Science, 2014, 2(7), 961-971. doi: 10.1039/c4bm00020j
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2013

  1. Joshi, R.; Feldmann, V.; Koestner, W.; Detje, C.; Gottschalk, S.; Mayer, H.A.; Sauer, M.G.; Engelmann, J. Multifunctional silica nanoparticles for optical and magnetic resonance imaging. Biological Chemistry, 2013, 394(1), 125–135. doi: 10.1515/hsz-2012-0251
  2. Skaat, H.; Corem-Salkmon, E.; Grinberg, I.; Last, D.; Goez, D.; Mardor, Y.; Margel, S. Antibody-conjugated, dual-modal, near-infrared fluorescent iron oxide nanoparticles for antiamyloidgenic activity and specific detection of amyloid-β fibrils. International Journal of Nanomedicine, 2013, 8, 4063–4076. doi: 10.2147/ijn.s52833
  3. Myung, J.-K.; Banuelos, C.A.; Fernandez, J.G.; Mawji, N.R.; Wang, J.; Tien, A.H.; Yang, Y.C.; Tavakoli, I.; Haile, S.; Watt, K.; McEwan, I.J.; Plymate, S.; Andersen, R.J.; Sadar, M.D. An androgen receptor N-terminal domain antagonist for treating prostate cancer. Journal of Clinical Investigation, 2013, 123(7), 2948–2960. doi: 10.1172/jci66398
  4. Chan, L.J.; Smith, C.M.; Chua, B.E.; Lin, F.; Bathgate, R.A.D.; Separovic, F.; Gundlach, A.L.; Hossain, M.A.; Wade, J.D. Synthesis of fluorescent analogs of relaxin family peptides and their preliminary in vitro and in vivo characterization. Frontiers in Chemistry, 2013, 1, Article 30. doi: 10.3389/fchem.2013.00030
  5. Petkau-Milroy, K.; Sonntag, M.; Colditz, A.; Brunsveld, L. Multivalent Protein Assembly Using Monovalent Self-Assembling Building Blocks. International Journal of Molecular Sciences, 2013, 14(10), 21189–21201. doi: 10.3390/ijms141021189
  6. Lee, A.; Chin, J.; Park, O.K.; Chung, H.; Kim, J.W.; Yoon, S.-Y.; Park, K. A novel near-infrared fluorescence chemosensor for copper ion detection using click ligation and energy transfer. Chemical Communications, 2013, 49, 5969–5971. doi: 10.1039/c3cc42059k
  7. Shabanpoor, F.; Gait, M.J. Development of a general methodology for labelling peptide–morpholino oligonucleotide conjugates using alkyne–azide click chemistry. Chemical Communications, 2013, 49, 10260–10262. doi: 10.1039/c3cc46067c
  8. Jain, D.; Siede, W. Rad5 Template Switch Pathway of DNA Damage Tolerance Determines Synergism between Cisplatin and NSC109268 in Saccharomyces cerevisiae. PLoS ONE, 2013, 8(10), e77666. doi: 10.1371/journal.pone.0077666
  9. Lee, S.; Ashizawa, A.T.; Kim, K.S.; Falk, D.J.; Notterpek, L. Liposomes to Target Peripheral Neurons and Schwann Cells. PLoS ONE, 2013, 8(11), e78724. doi: 10.1371/journal.pone.0078724
  10. Albertazzi, L.; Martinez-Veracoechea, F.J.; Leenders, C.M.A.; Voets, I.K.; Frenkel, D.; Meijer, E.W. Spatiotemporal control and superselectivity in supramolecular polymers using multivalency. Proceedings of the National Academy of Sciences of the U.S.A., 2013, 110(30), 12203-12208. doi: 10.1073/pnas.1303109110
  11. Aldeek, F.; Muhammed, M.A.H.; Palui, G.; Zhan, N.; Mattoussi, H. Growth of Highly Fluorescent Polyethylene Glycol- and Zwitterion-Functionalized Gold Nanoclusters. ACS Nano, 2013, 7(3), 2509-2521. doi: 10.1021/nn305856t
  12. Astakhova, I.K.; Hansen, L.H.; Vester, B.; Wengel, J. Peptide-LNA oligonucleotide conjugates. Organic & Biomolecular Chemistry, 2013, 11(25), 4240-4240. doi: 10.1039/c3ob40786a
  13. Astakhova, I.K.; Santhosh Kumar, T.; Campbell, M.A.; Ustinov, A.V.; Korshun, V.A.; Wengel, J. Branched DNA nanostructures efficiently stabilised and monitored by novel pyrene-perylene 2'-alpha-L-amino-LNA FRET pairs. Chemical Communications, 2013, 49(5), 511-511. doi: 10.1039/c2cc37547h
  14. Astakhova, I.K.; Wengel, J. Interfacing Click Chemistry with Automated Oligonucleotide Synthesis for the Preparation of Fluorescent DNA Probes Containing Internal Xanthene and Cyanine Dyes. Chemistry - a European Journal, 2013, 19(3), 1112-1122. doi: 10.1002/chem.201202621
  15. Cao, Z.; Partyka, K.; McDonald, M.; Brouhard, E.; Hincapie, M.; Brand, R.E.; Hancock, W.S.; Haab, B.B. Modulation of Glycan Detection on Specific Glycoproteins by Lectin Multimerization. Analytical Chemistry, 2013, 85(3), 1689-1698. doi: 10.1021/ac302826a
  16. Chang, Y.; Cai, C.; Li, L.; Miao, J.; Ucakturk, E.; Li, G.; Ly, M.; Linhardt, R.J. Ultrasensitive Detection and Quantification of Acidic Disaccharides Using Capillary Electrophoresis and Quantum Dot-Based Fluorescence Resonance Energy Transfer. Analytical Chemistry, 2013, 85(19), 9356-9362. doi: 10.1021/ac402242v
  17. Cheng, M.-C.; Leske, A.T.; Matsuoka, T.; Kim, B.C.; Lee, J.; Burns, M.A.; Takayama, S.; Biteen, J.S. Super-Resolution Imaging of PDMS Nanochannels by Single-Molecule Micelle-Assisted Blink Microscopy. The Journal of Physical Chemistry B, 2013, 117(16), 4406-4411. doi: 10.1021/jp307635v
  18. Damayanti, N.P.; Parker, L.L.; Irudayaraj, J.M.K. Fluorescence Lifetime Imaging of Biosensor Peptide Phosphorylation in Single Live Cells. Angewandte Chemie International Edition, 2013, 52(14), 3931-3934. doi: 10.1002/anie.201209303
  19. Gluz, E.; Grinberg, I.; Corem-Salkmon, E.; Mizrahi, D.; Margel, S. Engineering of new crosslinked near-infrared fluorescent polyethylene glycol bisphosphonate nanoparticles for bone targeting. Journal of Polymer Science, Part A: Polymer Chemistry, 2013, 51(20), 4282-4291. doi: 10.1002/pola.26858
  20. Gluz, E.; Mizrahi, D.M.; Margel, S. Synthesis and characterization of new poly(ethylene glycol)bisphosphonate vinylic monomer and non-fluorescent and NIR-fluorescent bisphosphonate micrometer-sized particles. Polymer, 2013, 54(2), 565-571. doi: 10.1016/j.polymer.2012.11.071
  21. Haller, A.; Altman, R.B.; Souliere, M.F.; Blanchard, S.C.; Micura, R. Folding and ligand recognition of the TPP riboswitch aptamer at single-molecule resolution. Proceedings of the National Academy of Sciences of the U.S.A., 2013, 110(11), 4188-4193. doi: 10.1073/pnas.1218062110
  22. Hartley, M.D.; Schneggenburger, P.E.; Imperiali, B. Lipid bilayer nanodisc platform for investigating polyprenol-dependent enzyme interactions and activities. Proceedings of the National Academy of Sciences of the U.S.A., 2013, 110(52), 20863-20870. doi: 10.1073/pnas.1320852110
  23. He, H.; Chen, S.; Zhou, J.; Dou, Y.; Song, L.; Che, L.; Zhou, X.; Chen, X.; Jia, Y.; Zhang, J. et al. Cyclodextrin-derived pH-responsive nanoparticles for delivery of paclitaxel. Biomaterials, 2013, 34(21), 5344-5358. doi: 10.1016/j.biomaterials.2013.03.068
  24. Kaastrup, K.; Chan, L.; Sikes, H.D. Impact of Dissociation Constant on the Detection Sensitivity of Polymerization-Based Signal Amplification Reactions. Analytical Chemistry, 2013, 85(17), 8055-8060. doi: 10.1021/ac4018988
  25. Kim, J.; Seo, M.-H.; Lee, S.; Cho, K.; Yang, A.; Woo, K.; Kim, H.-S.; Park, H.-S. Simple and Efficient Strategy for Site-Specific Dual Labeling of Proteins for Single-Molecule Fluorescence Resonance Energy Transfer Analysis. Analytical Chemistry, 2013, 85(3), 1468-1474. doi: 10.1021/ac303089v
  26. Lee, B.-S.; Amano, T.; Wang, H.Q.; Pantoja, J.L.; Yoon, C.W.; Hanson, C.J.; Amatya, R.; Yen, A.; Black, K.L.; Yu, J.S. Reactive Oxygen Species Responsive Nanoprodrug to Treat Intracranial Glioblastoma. ACS Nano, 2013, 7(4), 3061-3077. doi: 10.1021/nn400347j
  27. Lu, H.D.; Soranno, D.E.; Rodell, C.B.; Kim, I.L.; Burdick, J.A. Secondary Photocrosslinking of Injectable Shear-Thinning Dock-and-Lock Hydrogels. Advanced Healthcare Materials, 2013, 2(7), 1028-1036. doi: 10.1002/adhm.201200343
  28. Lu, X.; Song, C.-X.; Szulwach, K.; Wang, Z.; Weidenbacher, P.; Jin, P.; He, C. Chemical Modification-Assisted Bisulfite Sequencing (CAB-Seq) for 5-Carboxylcytosine Detection in DNA. Journal of the American Chemical Society, 2013, 135(25), 9315-9317. doi: 10.1021/ja4044856
  29. Mohan, K.; Donavan, K.C.; Arter, J.A.; Penner, R.M.; Weiss, G.A. Sub-nanomolar Detection of Prostate-Specific Membrane Antigen in Synthetic Urine by Synergistic, Dual-Ligand Phage. Journal of the American Chemical Society, 2013, 135(20), 7761-7767. doi: 10.1021/ja4028082
  30. Morton, S.W.; Herlihy, K.P.; Shopsowitz, K.E.; Deng, Z.J.; Chu, K.S.; Bowerman, C.J.; DeSimone, J.M.; Hammond, P.T. Scalable Manufacture of Built-to-Order Nanomedicine: Spray-Assisted Layer-by-Layer Functionalization of PRINT Nanoparticles. Advanced Materials, 2013, 25(34), 4707-4713. doi: 10.1002/adma.201302025
  31. Potapova, I.; Eglin, D.; Laschke, M.W.; Bischoff, M.; Richards, R.G.; Moriarty, T.F. Two-step labeling of Staphylococcus aureus with Lysostaphin-Azide and DIBO-Alexa using click chemistry. Journal of Microbiological Methods, 2013, 92(1), 90-98. doi: 10.1016/j.mimet.2012.11.004
  32. Rimpelová, S.; Bříza, T.; Králová, J.; Záruba, K.; Kejík, Z.; Císařová, I.; Martásek, P.; Ruml, T.; Král, V. Rational Design of Chemical Ligands for Selective Mitochondrial Targeting. Bioconjugate Chemistry, 2013, 24(9), 1445-1454. doi: 10.1021/bc400291f
  33. Saxena, T.; Karumbaiah, L.; Gaupp, E.A.; Patkar, R.; Patil, K.; Betancur, M.; Stanley, G.B.; Bellamkonda, R.V. The impact of chronic blood-brain barrier breach on intracortical electrode function. Biomaterials, 2013, 34(20), 4703-4713. doi: 10.1016/j.biomaterials.2013.03.007
  34. Sellrie, F.; Graser, E.; Lenz, C.; Hillebrand, T.; Schenk, J.A. Specific DNA detection using antibody mediated fluorescencequenching. Biosensors and Bioelectronics, 2013, 42, 512-515. doi: 10.1016/j.bios.2012.10.055
  35. Shen, H.; Shi, H.; Xie, M.; Ma, K.; Li, B.; Shen, S.; Wang, X.; Jin, Y. Biodegradable chitosan/alginate BSA-gel-capsules for pH-controlled loading and release of doxorubicin and treatment of pulmonary melanoma. Journal of Materials Chemistry B, 2013, 1(32), 3906-3906. doi: 10.1039/c3tb20330a
  36. Sloniec, J.; Resch-Genger, U.; Hennig, A. Photophysics and Release Kinetics of Enzyme-Activatable Optical Probes Based on H-Dimerized Fluorophores on Self-Immolative Linkers. The Journal of Physical Chemistry B, 2013, 117(46), 14336-14344. doi: 10.1021/jp409388b
  37. Soulière, M.F.; Altman, R.B.; Schwarz, V.; Haller, A.; Blanchard, S.C.; Micura, R. Tuning a riboswitch response through structural extension of a pseudoknot. Proceedings of the National Academy of Sciences of the U.S.A., 2013, 110(35), E3256-E3264. doi: 10.1073/pnas.1304585110
  38. Tang, H.; Sampath, P.; Yan, X.; Thorne, S.H. Potential for enhanced therapeutic activity of biological cancer therapies with doxycycline combination. Gene Therapy, 2013, 20(7), 770-778. doi: 10.1038/gt.2012.96
  39. Wang, C.; Ravi, S.; Garapati, U.S.; Das, M.; Howell, M.; Mallela, J.; Alwarappan, S.; Mohapatra, S.S.; Mohapatra, S. Multifunctional chitosan magnetic-graphene (CMG) nanoparticles: a theranostic platform for tumor-targeted co-delivery of drugs, genes and MRI contrast agents. Journal of Materials Chemistry B, 2013, 1(35), 4396-4396. doi: 10.1039/c3tb20452a
  40. Xie, M.; Shi, H.; Li, Z.; Shen, H.; Ma, K.; Li, B.; Shen, S.; Jin, Y. A multifunctional mesoporous silica nanocomposite for targeted delivery, controlled release of doxorubicin and bioimaging. Colloids and Surfaces B: Biointerfaces, 2013, 110, 138-147. doi: 10.1016/j.colsurfb.2013.04.009
  41. Xie, M.; Shi, H.; Ma, K.; Shen, H.; Li, B.; Shen, S.; Wang, X.; Jin, Y. Hybrid nanoparticles for drug delivery and bioimaging: Mesoporous silica nanoparticles functionalized with carboxyl groups and a near-infrared fluorescent dye. Journal of Colloid and Interface Science, 2013, 395, 306-314. doi: 10.1016/j.jcis.2013.01.001
  42. Yang, H.; Mao, H.; Wan, Z.; Zhu, A.; Guo, M.; Li, Y.; Li, X.; Wan, J.; Yang, X.; Shuai, X. et al. Micelles assembled with carbocyanine dyes for theranostic near-infrared fluorescent cancer imaging and photothermal therapy. Biomaterials, 2013, 34(36), 9124-9133. doi: 10.1016/j.biomaterials.2013.08.022
  43. Yuan, H.; Cho, H.; Chen, H.H.; Panagia, M.; Sosnovik, D.E.; Josephson, L. Fluorescent and radiolabeled triphenylphosphonium probes for imaging mitochondria. Chemical Communications, 2013, 49(88), 10361-10363. doi: 10.1039/c3cc45802d
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  47. Xie, M.; Shi, H.; Ma, K.; Shen, H.; Li, B.; Shen, S.; Wang, X.; Jin, Y. Hybrid nanoparticles for drug delivery and bioimaging: Mesoporous silica nanoparticles functionalized with carboxyl groups and a near-infrared fluorescent dye. Journal of Colloid and Interface Science, 2013, 395, 306-314. doi: 10.1016/j.jcis.2013.01.001

2012

  1. Liboska, R.; Ligasová, A.; Strunin, D.; Rosenberg, I.; Koberna, K. Most Anti-BrdU Antibodies React with 2'-Deoxy-5-Ethynyluridine ‒ The Method for the Effective Suppression of This Cross-Reactivity. PLoS ONE, 2012, 7(12), e51679. doi: 10.1371/journal.pone.0051679
  2. Liu, Z.; Miller, S.J.; Joshi, B.P.; Wang, T.D. In vivo targeting of colonic dysplasia on fluorescence endoscopy with near-infrared octapeptide. Gut, 2012, 62(3), 395-403. doi: 10.1136/gutjnl-2011-301913
  3. Adulnirath, A.; Chung, S.W.; Park, J.; Hwang, S.R.; Kim, J.-Y.; Yang, V.C.; Kim, S.Y.; Moon, H.T.; Byun, Y. Cyclic RGDyk-conjugated LMWH-taurocholate derivative as a targeting angiogenesis inhibitor. Journal of Controlled Release, 2012, 164(1), 8-16. doi: 10.1016/j.jconrel.2012.10.001
  4. Fan, H.; Zhang, I.; Chen, X.; Zhang, L.; Wang, H.; Da Fonseca, A.; Manuel, E.R.; Diamond, D.J.; Raubitschek, A.; Badie, B. Intracerebral CpG Immunotherapy with Carbon Nanotubes Abrogates Growth of Subcutaneous Melanomas in Mice. Clinical Cancer Research, 2012, 18(20), 5628-5638. doi: 10.1158/1078-0432.ccr-12-1911
  5. Gatzogiannis, E.; Chen, Z.; Wei, L.; Wombacher, R.; Kao, Y.-T.; Yefremov, G.; Cornish, V.W.; Min, W. Mapping protein-specific micro-environments in live cells by fluorescence lifetime imaging of a hybrid genetic-chemical molecular rotor tag. Chemical Communications, 2012, 48(69), 8694-8694. doi: 10.1039/c2cc33133k
  6. Kaastrup, K.; Sikes, H.D. Polymerization-based signal amplification under ambient conditions with thirty-five second reaction times. Lab on a Chip, 2012, 12(20), 4055-4055. doi: 10.1039/c2lc40584a
  7. Kim, J.-y.; Shim, G.; Choi, H.-w.; Park, J.; Chung, S.W.; Kim, S.; Kim, K.; Chan Kwon, I.; Kim, C.-W.; Kim, S.Y. et al. Tumor vasculature targeting following co-delivery of heparin-taurocholate conjugate and suberoylanilide hydroxamic acid using cationic nanolipoplex. Biomaterials, 2012, 33(17), 4424-4430. doi: 10.1016/j.biomaterials.2012.02.066
  8. Kim, W.-J.; Kim, A.; Huh, C.; Park, C.W.; Ah, C.S.; Kim, B.K.; Yang, J.-H.; Chung, K.H.; Choi, Y.H.; Hong, J. et al. Photo selective protein immobilization using bovine serum albumin. Applied Surface Science, 2012, 261, 880-889. doi: 10.1016/j.apsusc.2012.08.111
  9. Kovacic, S.; Samii, L.; Woolfson, D.N.; Curmi, P.M.G.; Linke, H.; Forde, N.R.; Blab, G.A. Design and Construction of a One-Dimensional DNA Track for an Artificial Molecular Motor. Journal of Nanomaterials, 2012, 2012, ID-ID 109238. doi: 10.1155/2012/109238
  10. McGouran, J.F.; Kramer, H.B.; Mackeen, M.M.; di Gleria, K.; Altun, M.; Kessler, B.M. Fluorescence-based active site probes for profiling deubiquitinating enzymes. Organic & Biomolecular Chemistry, 2012, 10(17), 3379-3379. doi: 10.1039/c2ob25258a
  11. Meimetis, L.G.; Williams, D.E.; Mawji, N.R.; Banuelos, C.A.; Lal, A.A.; Park, J.J.; Tien, A.H.; Fernandez, J.G.; de Voogd, N.J.; Sadar, M.D. et al. Niphatenones, Glycerol Ethers from the Sponge Niphates digitalis Block Androgen Receptor Transcriptional Activity in Prostate Cancer Cells: Structure Elucidation, Synthesis, and Biological Activity . Journal of Medicinal Chemistry, 2012, 55(1), 503-514. doi: 10.1021/jm2014056
  12. Molinari, C.E.; Casadio, Y.S.; Hartmann, B.T.; Livk, A.; Bringans, S.; Arthur, P.G.; Hartmann, P.E. Proteome Mapping of Human Skim Milk Proteins in Term and Preterm Milk. Journal of Proteome Research, 2012, 11(3), 1696-1714. doi: 10.1021/pr2008797
  13. Pecqueur, L.; Duellberg, C.; Dreier, B.; Jiang, Q.; Wang, C.; Pluckthun, A.; Surrey, T.; Gigant, B.; Knossow, M. A designed ankyrin repeat protein selected to bind to tubulin caps the microtubule plus end. Proceedings of the National Academy of Sciences of the U.S.A., 2012, 109(30), 12011-12016. doi: 10.1073/pnas.1204129109
  14. Preus, S.; Wilhelmsson, L.M. Advances in Quantitative FRET-Based Methods for Studying Nucleic Acids. ChemBioChem, 2012, 13(14), 1990-2001. doi: 10.1002/cbic.201200400
  15. Sparks, J.; Slobodkin, G.; Matar, M.; Congo, R.; Ulkoski, D.; Rea-Ramsey, A.; Pence, C.; Rice, J.; McClure, D.; Polach, K.J. et al. Versatile cationic lipids for siRNA delivery. Journal of Controlled Release, 2012, 158(2), 269-276. doi: 10.1016/j.jconrel.2011.11.006
  16. Truong, F.; Yoo, T.H.; Lampo, T.J.; Tirrell, D.A. Two-Strain, Cell-Selective Protein Labeling in Mixed Bacterial Cultures. Journal of the American Chemical Society, 2012, 134(20), 8551-8556. doi: 10.1021/ja3004667
  17. Zhou, K.; Liu, H.; Zhang, S.; Huang, X.; Wang, Y.; Huang, G.; Sumer, B.D.; Gao, J. Multicolored pH-Tunable and Activatable Fluorescence Nanoplatform Responsive to Physiologic pH Stimuli. Journal of the American Chemical Society, 2012, 134(18), 7803-7811. doi: 10.1021/ja300176w
  18. Zolotarskaya, O.Y.; Wagner, A.F.; Beckta, J.M.; Valerie, K.; Wynne, K.J.; Yang, H. Synthesis of Water-Soluble Camptothecin-Polyoxetane Conjugates via Click Chemistry. Molecular Pharmaceutics, 2012, 9(11), 3403-3408. doi: 10.1021/mp3005066

2011

  1. Zhao, D.; Alizadeh, D.; Zhang, L.; Liu, W.; Farrukh, O.; Manuel, E.; Diamond, D.J.; Badie, B. Carbon Nanotubes Enhance CpG Uptake and Potentiate Antiglioma Immunity. Clinical Cancer Research, 2011, 17(4), 771–782. doi: 10.1158/1078-0432.ccr-10-2444
  2. Ranasinghe, R.T.; Brown, T. Ultrasensitive fluorescence-based methods for nucleic acid detection: towards amplification-free genetic analysis. Chemical Communications, 2011, 47(13), 3717-3735. doi: 10.1039/c0cc04215c
  3. Song, C.-X.; Sun, Y.; Dai, Q.; Lu, X.-Y.; Yu, M.; Yang, C.-G.; He, C. Detection of 5-Hydroxymethylcytosine in DNA by Transferring a Keto-Glucose by Using T4 Phage beta-Glucosyltransferase. ChemBioChem, 2011, 12(11), 1682-1685. doi: 10.1002/cbic.201100278
  4. Song, C.-X.; Yu, M.; Dai, Q.; He, C. Detection of 5-hydroxymethylcytosine in a combined glycosylation restriction analysis (CGRA) using restriction enzyme Taq[alpha]I. Bioorganic & Medicinal Chemistry Letters, 2011, 21(17), 5075-5077. doi: 10.1016/j.bmcl.2011.03.118

2010

  1. Paredes, E.; Das, S.R. Click Chemistry for Rapid Labeling and Ligation of RNA. ChemBioChem, 2010, 12(1), 125-131. doi: 10.1002/cbic.201000466
  2. Ranall, M.; Gabrielli, B.; Gonda, T. Adaptation and validation of DNA synthesis detection by fluorescent dye derivatization for high-throughput screening. BioTechniques, 2010, 48(5), 379-386. doi: 10.2144/000113410
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